Browse of TCMCG057C25432 protein

CDS

Accession Number	TCMCG057C25432
gbkey	CDS
Protein Id	XP_018492393.1
Location	complement(join(22543121..22543165,22543269..22543442,22543734..22543874,22544311..22544418,22544580..22544706,22544799..22544867,22544948..22545056,22545409..22545534,22545628..22545934,22546010..22546078,22546361..22546719,22546842..22546918,22547145..22547332,22547464..22547747,22547841..22548003,22548181..22548746,22548842..22549028,22549133..22549315,22549450..22549567,22550043..22550140,22550280..22550384,22550498..22550583,22550677..22550834,22550993..22551050,22551130..22551376,22551457..22551801))
Gene	LOC108862679
GeneID	108862679
Organism	Raphanus sativus

Protein

Length	1498aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA344915
db_source	XM_018636891.1
Definition	PREDICTED: nuclear pore complex protein NUP160 isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category	UY
Description	Nuclear pore complex protein NUP160
KEGG_TC	1.I.1
KEGG_Module	M00427        [VIEW IN KEGG]
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03036        [VIEW IN KEGG]
KEGG_ko	ko:K14303        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03013        [VIEW IN KEGG] map03013        [VIEW IN KEGG]
GOs	GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005635        [VIEW IN EMBL-EBI] GO:0005643        [VIEW IN EMBL-EBI] GO:0006403        [VIEW IN EMBL-EBI] GO:0006405        [VIEW IN EMBL-EBI] GO:0006406        [VIEW IN EMBL-EBI] GO:0006611        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0006886        [VIEW IN EMBL-EBI] GO:0006913        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0008104        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009266        [VIEW IN EMBL-EBI] GO:0009409        [VIEW IN EMBL-EBI] GO:0009628        [VIEW IN EMBL-EBI] GO:0009719        [VIEW IN EMBL-EBI] GO:0009725        [VIEW IN EMBL-EBI] GO:0009733        [VIEW IN EMBL-EBI] GO:0010033        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0012505        [VIEW IN EMBL-EBI] GO:0015031        [VIEW IN EMBL-EBI] GO:0015833        [VIEW IN EMBL-EBI] GO:0015931        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016973        [VIEW IN EMBL-EBI] GO:0031090        [VIEW IN EMBL-EBI] GO:0031503        [VIEW IN EMBL-EBI] GO:0031965        [VIEW IN EMBL-EBI] GO:0031967        [VIEW IN EMBL-EBI] GO:0031975        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0033036        [VIEW IN EMBL-EBI] GO:0034613        [VIEW IN EMBL-EBI] GO:0042221        [VIEW IN EMBL-EBI] GO:0042886        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0045184        [VIEW IN EMBL-EBI] GO:0046907        [VIEW IN EMBL-EBI] GO:0050657        [VIEW IN EMBL-EBI] GO:0050658        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051028        [VIEW IN EMBL-EBI] GO:0051168        [VIEW IN EMBL-EBI] GO:0051169        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051236        [VIEW IN EMBL-EBI] GO:0051641        [VIEW IN EMBL-EBI] GO:0051649        [VIEW IN EMBL-EBI] GO:0070727        [VIEW IN EMBL-EBI] GO:0071166        [VIEW IN EMBL-EBI] GO:0071426        [VIEW IN EMBL-EBI] GO:0071427        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071705        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGAGTCGAATCGTCGGAGTTCGCCTGGCGGTATGGAGGTTCCAGTCGCAGGCGGCGGAAATGTCGTCAAGTGGCTCGATATATCCGTCCCTCCTCTTCCTCCTCCTTCTCCTTCTACGGAGGAGGACAATGGATACGTTCTCCTTCCTTCGTCGGAAGAAGACTACGCTTCGAGCTGTGTACTTGGCGAGCCTCCGATCTCTTTCGTTTGTAGAATCAACAAAACGAGGTCAAACGTTCTCGACCTTCTTCAGCTCTCTGCTAAATCTGGTTTTCCATTAACCGGGCTTCGTTTCGTCTTCGCTCACACCCTCTCTCCTTTCGCTTTTCTATCCGCCGACGAGGGAAGTGAGAGTGGTCGTCTCGTCTTCTTTCTCTACGCTCTCTCGCCATCTGGTGTTGTCTACGTCCTCAAAATCGAGAATACTTCGTCCTATAAGTCTGGCTCGGTCTTCCCGCTTGACCATCTGATCCACTTGAATGTTCGACCATACTTGAACGAAACTCATGTTACCAGTGTGGCTGCATCGCCTGGATTCCTTTTCCTTGGGAGATCAGATGGCTCTGTCTCTTCTTTCCAACCTGCATCAGGTTTCCACCAGGAGCTGCGTGATGATACAGGACTTGGTCGTCTTTGGGGTTTTGTAAGGGGGACAGTTGTTGCTGCCGTGCAAGATTTATGTATATCAGAAGTTTATGGAAGAAACTTGATATGCGTGCTTCATGCTGACGGGGGGTTACGTGTGTGGGACATTCTGACCTGTAGCAGGGTTTTGTGTCAGAGTATAGCTGCTAAAAACGTTGAGGGGGTTGTGTGTCTGAGGTTATGGTTGGGCAAAGTTGATTACGTTAATGGCATCATTCCTTTAGCTGTCTTGTATAGGAATACTATGGGAGACAACGTGGACGTGATCACTGTATATGACCTGCACTTTAGTTCTGGGGAGAGGATAGCCTTGTCTCTGGATTCTGGACTACAGAATATTTCACTAGAAGGGGGGGAACTGCGGGATGTCAGATTTACTTCCGACGAGATTTGGACTCTGAAGACTGATGAATTGACATCTCACGTGTTGTACCAGAAATCTAGCACCATGGAAGCACGGTCTTACACTTTACAGGAGGAATACATTTCTGAACAGTTATTTCTGAGTGCTAGGAGCTCTTCGCATGACCTTCTTTTGACTTCACATTCACTTTTTTCATCCGCAAAGGATCAAATTATGGGATTCATTTCATCAGTCTTCTTACGTAGGCTTCTTTGTCCTGGAATTTTTCACACTGTTGCCTTGCGTCTAACTTTACGGGACCACAACAAACACTGGACTGATTCTGAATTTCAATCCTTAAGTCTTGATGAGCTTAAAAGCGAGATTCTTTTACTAGTTGAGGAAGAGGTTACTGGTGAGACTTCTATTTCAGTTTTTCACTGGTGGGAAAACTTTTGTTCGTGCTATCTTGATCACTGGTGCAACAATAACGAACCTTGCACGTTGTTGGTTCAGTCAGATGTTATTGGTTTAGTTAGAAACGATTCTGTATCACTGTTCTTTAGATCAGAGAACGTTGAGCACAGCCTTGGAGGATCTTCCTCCGAACACAGCAACCTGACAAGCTTAGGCTTTGGGATGTCTACCAATGAACATGGGATTCTGTCGGAGGTACTAAGATGTATTTCGAAGATCAATAAGCAGTGGGGTGCTGCTCCTTATGCCATGTATTATGAATCGGTTACTGGAAGGCCAGTTATATCATCTGAGGAAATTGTTCCTCGCTTAGTTAACATCCTTGAGTCGGGATATGCAATGTCCATAGGTCAGCGTACTTGGTCGGATCTTGGTGCTGATAGAGCACGGGACAAAGAGCTAGAAGCTCATAAAAATCTTAGAACATTCTCCATTGAAATGTTATTGTCTCTCTCTGCTCTATGTCAAAGGGCTGGATCTTGGGAAAAGGTTTTTACTATCATGGAGCACTATTTGCAGTATCTGGTCCCTAAGAAAGTTATGCATAACAATGATAGCGAGACATTATCAGATATCTGTAGTTCTATCCTTGTTCAAGCCACTTCTCAGTTTGCAAAGGTGATGTTTGAGTCTGCCATTGACATCTTCCTAATCGTCAGCTATCTGCTTAACATCTCCGGGCAGGTAAATATGTCACAGCAAGATATATGTAAGCTACGGCTGGAATTGCTTCCGATGATCCAAGATATTGTCTCAGAGTGGCTGATCATTCTTTTCTTTGTTACCACGCCGGCTCAATTGACTTCAGTGGAAGATTTCAGCTTTAAGCTCTCATCTCTTCAGATTGATAGCAGCATTGACAGAAGATCATGGAACACAATGCTTGGGAAATGCGGTTTCTCATTGGCGTATATTCTTCTTTTCAGTGACCGGAGTTGCAATGTGGATAGCCGATTTAACTGGATTCGACTTAGATATCTTCCAAGTTCACAAAGCATTACAAGCTTGGTACAAAACTTCATTAGCTGGATTCGTTATAGTAAAACTGGAGAGGACTCTTCTTCTTTGCTAAGACGCTCAACTGAGCTTACTCTTAGGTTGATTAGGAATGGACAGGCTGATGCTGTCGAGCGAATCCTTTTGATTGTCGAGGCAAGTTTACGTGGGGAGAAAACATTTGGACATGCCCAAGATACCAATGGAGATTGGTGTCTTCTTCAACATATCCGTGGTTGTTGCCTCCTTGATGAAGTGCAGCGTGGAGCGTGCGGGGTATTAAAAGAGAGAAAGATTAGTGATGCCATCCGCTGCTTCTTCAGAGCTTCATCAGGTGAAGGATCTTGGAAGGCTTTGCACAGCTTGGCTAAAGAAGCAGGATTTTCACATTCCACAATTGGTGCCAGTATTTCAGATGGTGAAAATTCTTGTGCCACATGGAAACTTCATTACTATGAATGGGCTATGCAAATTTTTGAACGGTACAATATAAGTGAAGGAGCTTGTCAGTTTGCGTACGCAGCCCTTGAGCAAGTAGATGAGGCCATTAATTTCATGGAGAGTAGTGAGAACGTCCATCCACCTGTAACAGCCACTTACTGTAGAGGACGACTGTGGGCAAATGTTTTCAAGTTCACGTTAGATCTGAATCTCTTGAATGATGCTTACTGCGCTATTATTTCGAACCCTGATGAGGAAATTAAGCGCATCTGTTTGAGGCGCTTCATAATAGTTCTATTTGAATGTGGCAAAACCAAGATCCTCATTGATGGACATCTGCCTTTCATCGGCTTATCAGAGAAGATCACCCAAGAGCTTTTTTGGAAGGCTGGGCGTTCCGAGATAATGATTAAGCCAAATCCATACAAGCTGCTTTATGCTTACGAGATGAAACGACACAATTGGCGAATGGCGGCAAGTTACATGTATCAGTTTTCTGCTCGTCTGAGAAGTGAGGCAGGATCCACGGATTATAAACACAAGACCCTAGTTTTGCAAGAGAGGCTTAATGGACTTTCTGCTGCTATAAATGCATTAAGTCTTGTGCATCCTGGGTATGCTTGGATTGATCCACTACCAGAAGAATCCATGCATTATCCAGCAAAAAAGGCTAAAAGAGTAGAAGAACAACAATTAAGGAGTAATGACCAGCCCAAAGGGGATCAGAGTTGCATTGATATCGAGAAAATCCAAAACGAGTTTGTTTTCACTACAGCAGAATATCTGCTTTCTCTGAAAAACTTCGAGTGGACATATTCAGGGCTCGAAAAACCACCACCGGACTTGGTTGACCTTCTTGTCCAGGCAGACTTGTATGACATGGCATTCACTGTTGTTTTAAAATTTTGGAGAGGCTCAGCTTTGAAAAAGGAGCTGGAAAAGATATTTGAGAATATGGCAATAAGATGTTGCCCTGCTAAAGGAACGCTGTGGTCATCAAATGATCTCAGGCCTAATCTTATGTTAACATCTACGGAAGACGAAGTCACCCATTCGCCTGATAGAAGCCCTGCTGTTCAAAGCTCCAACTTGGCTGGTGACTGGGAAATTCTTGAGGTTTATCTTAAGAGGTACAAAGACATACACGCTAGATTGCCAGTTATTGTTGCTTCAACCCTTCTTCAGGCAGATTCTTGTATAGAGTTGCCTCTTTGGCTGGTTCACATGTTCAAGGATGGTAAGAAGGAGAAAGCTTTGGGAATGGGTGGGCAAGAAGCAAGTCCTGCTTCATTGTTTCAGTTATATGTTGACTATGGGCGTCTTTCAGAGGCCACTAATTTGCTATTGGAGTACATGGAATCATTTGCATCATCGAAACCAGCAGAGGTATTGAAAAGGAAAAAGGTATCAGGGGTTTGGTTTCCTTACACAACAGTGGAAAGACTATGGTGGGCGCTAGAGAAAACGATGAACTCAGGACGGATGCTGGAGCAGTGCCAGAAGCTTAAGGGACAACTCCAACAAGCGTTACTCAATCACTTAAAGCTGCTGAAGGTTGACTCGGATGATGCTGTGTCGTCTGCAGCTGGTTGA

Protein:   MESNRRSSPGGMEVPVAGGGNVVKWLDISVPPLPPPSPSTEEDNGYVLLPSSEEDYASSCVLGEPPISFVCRINKTRSNVLDLLQLSAKSGFPLTGLRFVFAHTLSPFAFLSADEGSESGRLVFFLYALSPSGVVYVLKIENTSSYKSGSVFPLDHLIHLNVRPYLNETHVTSVAASPGFLFLGRSDGSVSSFQPASGFHQELRDDTGLGRLWGFVRGTVVAAVQDLCISEVYGRNLICVLHADGGLRVWDILTCSRVLCQSIAAKNVEGVVCLRLWLGKVDYVNGIIPLAVLYRNTMGDNVDVITVYDLHFSSGERIALSLDSGLQNISLEGGELRDVRFTSDEIWTLKTDELTSHVLYQKSSTMEARSYTLQEEYISEQLFLSARSSSHDLLLTSHSLFSSAKDQIMGFISSVFLRRLLCPGIFHTVALRLTLRDHNKHWTDSEFQSLSLDELKSEILLLVEEEVTGETSISVFHWWENFCSCYLDHWCNNNEPCTLLVQSDVIGLVRNDSVSLFFRSENVEHSLGGSSSEHSNLTSLGFGMSTNEHGILSEVLRCISKINKQWGAAPYAMYYESVTGRPVISSEEIVPRLVNILESGYAMSIGQRTWSDLGADRARDKELEAHKNLRTFSIEMLLSLSALCQRAGSWEKVFTIMEHYLQYLVPKKVMHNNDSETLSDICSSILVQATSQFAKVMFESAIDIFLIVSYLLNISGQVNMSQQDICKLRLELLPMIQDIVSEWLIILFFVTTPAQLTSVEDFSFKLSSLQIDSSIDRRSWNTMLGKCGFSLAYILLFSDRSCNVDSRFNWIRLRYLPSSQSITSLVQNFISWIRYSKTGEDSSSLLRRSTELTLRLIRNGQADAVERILLIVEASLRGEKTFGHAQDTNGDWCLLQHIRGCCLLDEVQRGACGVLKERKISDAIRCFFRASSGEGSWKALHSLAKEAGFSHSTIGASISDGENSCATWKLHYYEWAMQIFERYNISEGACQFAYAALEQVDEAINFMESSENVHPPVTATYCRGRLWANVFKFTLDLNLLNDAYCAIISNPDEEIKRICLRRFIIVLFECGKTKILIDGHLPFIGLSEKITQELFWKAGRSEIMIKPNPYKLLYAYEMKRHNWRMAASYMYQFSARLRSEAGSTDYKHKTLVLQERLNGLSAAINALSLVHPGYAWIDPLPEESMHYPAKKAKRVEEQQLRSNDQPKGDQSCIDIEKIQNEFVFTTAEYLLSLKNFEWTYSGLEKPPPDLVDLLVQADLYDMAFTVVLKFWRGSALKKELEKIFENMAIRCCPAKGTLWSSNDLRPNLMLTSTEDEVTHSPDRSPAVQSSNLAGDWEILEVYLKRYKDIHARLPVIVASTLLQADSCIELPLWLVHMFKDGKKEKALGMGGQEASPASLFQLYVDYGRLSEATNLLLEYMESFASSKPAEVLKRKKVSGVWFPYTTVERLWWALEKTMNSGRMLEQCQKLKGQLQQALLNHLKLLKVDSDDAVSSAAG